This does work with a converted Whole Genome Test, however it is a lot of work! Bottom line, get the report! Seeking Health, I beg you to allow files bigger than 25mb (up to 65mb please), and thank you!
I used the instructions from geneticlifehacks website under the article: "Convert Your Whole Genome File" to convert my Whole Genome to a 23&Me Version 5 format.
You will use the WGS Extract program to convert your raw .BAM file to a .txt file with all of the SNP's you can think of plus any version AKA Ancestry V2, 23&Me V3, V,4, V5, ect. Unfortunately, this combined file is ~50mb (about 2 million SNP's), and StrateGene's upload will only allow a maximum of 25mb. 23&Me version 5 is about 600,000 SNP's.
I originally tried to combine an Ancestry version 2 with a 23&Me version 5, however the combined file size is ~35mb. So I combined an Ancestry V2 with 23&Me V3 file; however many SNP's will be missing. I then took MANY MANY hours to manually check and enter every SNP for every gene using SNPedia searching by gene. I also had to convert some 23&me version 3 ids from "i" to "rs" (what a pain). The combined .txt file came out to ~24mb and the final report was only missing (and I don't know why, but I can manually check them): SULT1A1, GAMT, and SUOX (also note G6PD is missing, but it is noted that G6PD is not checked by strategene).
I hope this helps someone and I am sorry it is so complicated. All Seeking Health needs to do is allow upload files up to 65mb and it…